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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837516.1_cds_XP_016506645.1_19851
CDS Infomation

[gene=LOC107824409] [db_xref=GeneID:107824409] [protein=E3 ubiquitin-protein ligase FANCL-like isoform X2] [protein_id=XP_016506645.1] [location=complement(join(3409..3484,3585..3708,3783..3913,4170..4241,4322..4379,4466..4580,4790..4864,4942..5020,5700..5704))] [gbkey=CDS]
Sequence

ATGATGGACAAGAAGGGAAGGATGCACATTGTGCAGATAACTTTGGATGGAACATATCCT
AACCATCCACCTTCAATATCAGCGGACATGCCTTATCTCTTCAATGTGGAATGGTCAATA
AACTCAAGACTAAAAGATGTTATCCGACAGTTTCAGCAGCATATGGATAAGCTTCAGGAG
TTTTGGAATATAATGGATGACATTGACCACTCTCTTTTGGTGTCTGACCTAAGATATCCT
CAACGTGCTTCGTCACATCGCCAACTTAATATAGGCAATGACTGCTATATCATGTTTTTT
ATAGATGCTAATGATCCAACATCCCTACCAGACTGTCGCTTTCTCGGTTCAGATTCAGAG
GTGGAGAGATTGAGGGCGATGTGGAGGAGAAACTGCAAAAGATGGATGAAAGACAAGCCA
TTTTCTGAGAATCTTGCAAATGTATTGGATGTTCAACTTCATGGACCTTCAAGCGTTGAG
AAAACTGATCCACAAACTGAATGTGGCATTTGTTATGCGCAATATCTTCCAATTGATGAT
GAACTTGGTGCTAAGAGTGGAAGTGGCACTGATTGTACATGTGAAAATAACAGCTGCAGT
AGGGCCTTCCACAGTGTTTGCCTCGGAGATTGGTTGAGTTCCATCACAACAACAAGACAG
TCATTTGATGTTCTATTCGGGAATTGTCCATACTGTTCTGATCCAATTGCTGTCAAAATC
AATACTAGGAAGTAA

Peptide Sequence

PEP ID

XP_016506645.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase FANCL-like isoform X2 [Nicotiana tabacum]
Sequence

MMDKKGRMHIVQITLDGTYPNHPPSISADMPYLFNVEWSINSRLKDVIRQFQQHMDKLQE
FWNIMDDIDHSLLVSDLRYPQRASSHRQLNIGNDCYIMFFIDANDPTSLPDCRFLGSDSE
VERLRAMWRRNCKRWMKDKPFSENLANVLDVQLHGPSSVEKTDPQTECGICYAQYLPIDD
ELGAKSGSGTDCTCENNSCSRAFHSVCLGDWLSSITTTRQSFDVLFGNCPYCSDPIAVKI
NTRK

Transcript Sequence

Gene sequence data has not been registered.